Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00217860 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G05340 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035683 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g096157 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104337 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13795 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g21708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g23669 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g44810 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02043 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04237 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07462 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14569 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17285 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30600 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31152 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31201 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36528 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g37466 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03858 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07500 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16416 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18769 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19283 | CRR2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g21031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22752 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30595 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47378 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g51296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54931 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g60956 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g62017 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g63296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27890 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27910 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g40270 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05235 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g09867 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13985 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16856 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23681 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023878 | No alias | not classified & original description: CDS=1-2883 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0134.g049386 | No alias | not classified & original description: CDS=1-2409 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03375 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07323 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07412 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07741 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20235 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20884 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29529 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29703 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34643 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35153 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g56780 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G018600.1 | Ceric.01G018600 | not classified & original description: pacid=50592052... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G047700.1 | Ceric.02G047700 | not classified & original description: pacid=50586056... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G024400.1 | Ceric.07G024400 | not classified & original description: pacid=50626298... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G031500.1 | OTP84, Ceric.10G031500 | not classified & original description: pacid=50611993... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z079200.1 | CRR22, Ceric.1Z079200 | not classified & original description: pacid=50582193... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G015100.1 | Ceric.20G015100 | not classified & original description: pacid=50567311... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G032000.1 | Ceric.23G032000 | not classified & original description: pacid=50611416... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27443 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07156 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07745 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g35846 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13211 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18185 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18756 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23570 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26344 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28512 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g40573 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46247 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48258 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14557 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015521001 | No alias | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032950001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g18810.1 | LOC_Os02g18810 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08835 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18263 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54672 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g19657 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_121512g0010 | No alias | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05885 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07843 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10381 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13682 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g21521 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g31921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38627 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g38774 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43650 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10959 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03007 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g22252 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03806 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g22121 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53363 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019295 | No alias | not classified & original description: CDS=1-1539 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09699 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27568 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g34625 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g34681 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39876 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114660.1.1 | Solyc03g114660 | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01958 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02212 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06871 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08093 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14177 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14289 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21394 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22005 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g52133 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g16806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g19341 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g19923 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21831 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g43995 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 313 | 361 |
| IPR002885 | Pentatricopeptide_repeat | 212 | 259 |
| IPR002885 | Pentatricopeptide_repeat | 414 | 462 |
| IPR002885 | Pentatricopeptide_repeat | 515 | 561 |
| IPR002885 | Pentatricopeptide_repeat | 278 | 311 |
| IPR002885 | Pentatricopeptide_repeat | 88 | 112 |
| IPR002885 | Pentatricopeptide_repeat | 591 | 617 |
| No external refs found! |
