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  5. Ppi_g62036

Ppi_g62036


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g62036
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.02 OrthoFinder output from all 47 species
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G69295 PDCB4 plasmodesmata callose-binding protein 4 0.03 OrthoFinder output from all 47 species
AT1G79480 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G05430 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09462 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G09464 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G09465 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G09466 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G09467 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G63225 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37718.t1 Aspi01Gene37718 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0259.g060656 No alias not classified & original description: CDS=357-1106 0.02 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.04 OrthoFinder output from all 47 species
Ceric.27G008500.1 Ceric.27G008500 not classified & original description: pacid=50604777... 0.05 OrthoFinder output from all 47 species
Ceric.37G009700.1 Ceric.37G009700 not classified & original description: pacid=50616747... 0.04 OrthoFinder output from all 47 species
Dac_g04582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g58555.1 LOC_Os04g58555 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50490.3 LOC_Os05g50490 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428056g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024478 No alias not classified & original description: CDS=949-2307 0.02 OrthoFinder output from all 47 species
Sam_g35966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g101120.4.1 Solyc01g101120 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g071200.4.1 Solyc02g071200 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g115200.3.1 PDCB1, Solyc03g115200 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g062020.2.1 Solyc07g062020 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Solyc09g091920.3.1 Solyc09g091920 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc11g012580.2.1 Solyc11g012580 Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g37664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e010706_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022608_P001 Zm00001e022608 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e035487_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 102 172
No external refs found!