Ppi_g62436 (EXP15, ATEXPA15,...)


Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g62436

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264980 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00153780 ATEXPA20,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AT3G29030 EXP5, ATHEXP... expansin A5 0.02 OrthoFinder output from all 47 species
Azfi_s0348.g066441 ATEXPA10,... alpha-class expansin & original description: CDS=1-666 0.03 OrthoFinder output from all 47 species
Azfi_s0891.g091270 ATEXPA10,... alpha-class expansin & original description: CDS=75-896 0.03 OrthoFinder output from all 47 species
Ceric.05G087800.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G045500.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40730.1 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e017221_P001 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e023169_P003 ATHEXP BETA 1.1,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 33 113
IPR007117 Expansin_CBD 125 202
No external refs found!