Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00084250 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g27110... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00078p00067180 | EMB2261,... | Pentatricopeptide repeat-containing protein At2g46050,... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004447 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g056436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g083315 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g101241 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g44160 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g03960 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13258 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g20781 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g33780 | DOT4 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g35743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04456 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05738 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06307 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07482 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24134 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g27203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g31748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36879 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03164 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g03649 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28525 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0166.g054406 | No alias | not classified & original description: CDS=1-3468 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0233.g059353 | No alias | not classified & original description: CDS=91-3312 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20751 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G076800.1 | Ceric.13G076800 | not classified & original description: pacid=50635128... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G024700.1 | Ceric.18G024700 | not classified & original description: pacid=50621916... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19071 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12220 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17290 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50116 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g41493 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g12280 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_12832 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_31111 | EMB2758 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03238 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18585 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23462 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54484 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07814 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10644 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05630 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g17153 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27069 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34542 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46085 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05398 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g30346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04191 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13496 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g51546 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g61912 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63497 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63652 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63872 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g66518 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17865 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22600 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g22838 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30572 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13340 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0028.g009863 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2568 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019261 | No alias | not classified & original description: CDS=1-3048 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021932 | No alias | not classified & original description: CDS=1-3567 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g06265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11635 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19797 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24755 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35469 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo81196 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15123 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16206 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30543 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56457 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13647 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g17439 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17636 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26741 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008183_P001 | Zm00001e008183 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 503 | 522 |
| IPR002885 | Pentatricopeptide_repeat | 101 | 123 |
| IPR002885 | Pentatricopeptide_repeat | 301 | 326 |
| IPR002885 | Pentatricopeptide_repeat | 200 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 604 | 629 |
| IPR002885 | Pentatricopeptide_repeat | 403 | 427 |
| IPR002885 | Pentatricopeptide_repeat | 532 | 562 |
| IPR002885 | Pentatricopeptide_repeat | 124 | 171 |
| IPR002885 | Pentatricopeptide_repeat | 327 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 226 | 273 |
| IPR002885 | Pentatricopeptide_repeat | 428 | 475 |
| No external refs found! |
