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  5. Ppi_g63892

Ppi_g63892


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g63892
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00215810 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00216540 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT3G50940 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Aev_g03969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g42032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10195 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06417.t1 Aspi01Gene06417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011534 No alias not classified & original description: CDS=1-1398 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034525 No alias not classified & original description: CDS=1-2166 0.05 OrthoFinder output from all 47 species
Ceric.19G070900.1 Ceric.19G070900 not classified & original description: pacid=50575977... 0.02 OrthoFinder output from all 47 species
Ceric.19G071300.1 Ceric.19G071300 not classified & original description: pacid=50576608... 0.03 OrthoFinder output from all 47 species
Ceric.19G071900.1 Ceric.19G071900 not classified & original description: pacid=50575289... 0.03 OrthoFinder output from all 47 species
Dcu_g06996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010372001 No alias AAA-ATPase At2g18193 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01027397001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01029202001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g19260.1 AATP1, LOC_Os01g19260 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g40140.1 LOC_Os01g40140 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58790.1 LOC_Os03g58790 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g51130.1 BCS1, LOC_Os05g51130 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09490.1 AATP1, LOC_Os07g09490 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g07739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_354707g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_7834209g0010 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g03762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022181 No alias not classified & original description: CDS=1-984 0.02 OrthoFinder output from all 47 species
Sam_g16984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g007470.4.1 Solyc05g007470 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013138_P001 Zm00001e013138 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 40 128
IPR003959 ATPase_AAA_core 368 424
IPR003959 ATPase_AAA_core 256 317
No external refs found!