Aev_g14600 (RAP2.12)

Aliases : RAP2.12

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g14600

Target	Alias	Description	ECC score	Gene Family Method
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT3G11020	DREB2B, DREB2	DRE/CRT-binding protein 2B	0.02	OrthoFinder output from all 47 species
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.02	OrthoFinder output from all 47 species
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Als_g04727	HRE2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g04116	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Aob_g22889	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Aop_g13916	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene70904.t1	Aspi01Gene70904	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0154.g053565	RAP2.6	subgroup ERF-X transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0193.g057138	No alias	subgroup ERF-I transcription factor & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0233.g059392	DEAR3	not classified & original description: CDS=1-1401	0.02	OrthoFinder output from all 47 species
Ceric.10G018900.1	ERF2, ATERF2,...	subgroup ERF-VI transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g04281	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Gb_20532	DEAR3	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_24891	RAP2.12	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Gb_26438	HRE1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	OrthoFinder output from all 47 species
LOC_Os05g29810.1	ERF72, EBP,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Lfl_g06071	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Lfl_g40989	No alias	subgroup ERF-V transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_166248g0020	ERF-1, ATERF-1	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_18454g0020	ATERF3, ERF3	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_19420g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_2040g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_8552524g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
MA_9588449g0010	ERF1, ATERF1	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Mp5g01050.1	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Msp_g04750	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g23306	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g21385	PUCHI	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g00637	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g03807	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025602	No alias	subgroup ERF-V transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g18921	No alias	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Spa_g05270	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g05595	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g05596	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g52172	TINY2	subgroup ERF-III transcription factor & original...	0.07	OrthoFinder output from all 47 species
Tin_g06782	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Zm00001e000689_P001	Zm00001e000689	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
Zm00001e002358_P001	ERF-6-6, ERF6,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e013096_P001	ATERF3, ERF3,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e033072_P001	RAP2.11, Zm00001e033072	transcription factor (ERF). transcription factor (ERN1)	0.02	OrthoFinder output from all 47 species
Zm00001e036260_P001	RAP2.12, Zm00001e036260	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004618	phosphoglycerate kinase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	121	169

External Links

No external refs found!

Aev_g14600 (RAP2.12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation