Aliases : CCL
Description : regulatory protein *(LIR1) of ferredoxin-NADP oxidoreductase activity & original description: none
Gene families : OG0007865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007865_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g04797 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00166750 | CCL,... | Photosynthesis.photophosphorylation.linear electron... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007568 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09691 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62894 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g28012 | No alias | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15374 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07253 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g01340.1 | CCL, LOC_Os01g01340 | LIR1 protein involved in ferredoxin-NADP oxidoreductase... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06887 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g19440 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29015 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g00779 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g17541 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.05 | OrthoFinder output from all 47 species | |
| Smo444139 | No alias | Photosynthesis.photophosphorylation.linear electron... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g03469 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g00199 | CCL | regulatory protein *(LIR1) of ferredoxin-NADP... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009856 | Lir1 | 24 | 131 |
| No external refs found! |
