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  5. Ore_g05196

Ore_g05196


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g05196
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267110 OSB1,... Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
Adi_g035312 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g052188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42177 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06681 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g31716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene37377.t1 Aspi01Gene37377 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61369.t1 CRR22, Aspi01Gene61369 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g035795 No alias not classified & original description: CDS=1-2223 0.04 OrthoFinder output from all 47 species
Azfi_s0219.g058621 No alias not classified & original description: CDS=1-3672 0.06 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45697 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g49960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g73650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G077400.1 Ceric.18G077400 not classified & original description: pacid=50622022... 0.04 OrthoFinder output from all 47 species
Dac_g04286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g26710 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13009 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g53095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016088 No alias not classified & original description: CDS=1-1020 0.05 OrthoFinder output from all 47 species
Smo89434 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo98551 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.07 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g16989 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 80 103
IPR002885 Pentatricopeptide_repeat 4 52
No external refs found!