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  5. Ore_g06073

Ore_g06073 (RPS18A, PFL, PFL1)


Aliases : RPS18A, PFL, PFL1

Description : component *(uS13) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g06073
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00178430 RPS18A, PFL,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT1G34030 No alias Ribosomal protein S13/S18 family 0.02 OrthoFinder output from all 47 species
Adi_g079654 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Adi_g110360 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g07943 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0393.g067809 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cre06.g272950 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dde_g34947 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01017975001 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_28114 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os03g58050.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp1g07420.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pp3c16_2090V3.1 RPS18A, PFL,... Ribosomal protein S13/S18 family 0.02 OrthoFinder output from all 47 species
Pp3c6_21770V3.1 RPS18A, PFL,... Ribosomal protein S13/S18 family 0.01 OrthoFinder output from all 47 species
Sam_g32254 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g35155 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Tin_g22509 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e005967_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!