Description : assembly factor involved in RuBisCo assembly *(BSD2) & original description: none
Gene families : OG0007502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007502_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g07584 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00065110 | evm_27.TU.AmTr_v1... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G47650 | No alias | DnaJ/Hsp40 cysteine-rich domain superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
| Ala_g06623 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g00356 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26060 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0168.g054582 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G042600.1 | Ceric.36G042600 | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38788 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03433 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g14872 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01015532001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01015534001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035845001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g22690.1 | LOC_Os06g22690 | BSD2 assembly factor involved in RuBisCo assembly | 0.06 | OrthoFinder output from all 47 species | |
| Len_g00237 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40205 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11910 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g29361 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g01616 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60370 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g57647 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0085.g018366 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15087 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g009440.2.1 | Solyc12g009440 | BSD2 assembly factor involved in RuBisCo assembly | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g03931 | No alias | assembly factor involved in RuBisCo assembly *(BSD2) &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
