Aliases : PAM68
Description : protein involved in PS-II assembly *(PAM68) & original description: none
Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g07606 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00088520 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G19100 | PAM68 | Protein of unknown function (DUF3464) | 0.04 | OrthoFinder output from all 47 species | |
| AT5G52780 | No alias | Protein of unknown function (DUF3464) | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g112211 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g112212 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g21605 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g24035 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021759.13 | PAM68 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| Cre07.g329000 | PAM68 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g19962 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g28925 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01018633001 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01028843001 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g21530.1 | PAM68, LOC_Os06g21530 | PAM68 protein involved in PS-II assembly | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g38910.1 | LOC_Os10g38910 | PAM68 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species | |
| Len_g39443 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_268175g0010 | PAM68 | PAM68 protein involved in PS-II assembly | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g19463 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039016_P001 | PAM68, Zm00001e039016 | PAM68 protein involved in PS-II assembly | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021855 | PAM68-like | 63 | 187 |
| No external refs found! |
