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  5. Ore_g08780

Ore_g08780 (TAF15)


Aliases : TAF15

Description : component *(TAF15) of TFIId basal transcription regulation complex & original description: none


Gene families : OG0003584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g08780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00107550 TAF15,... RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Ceric.10G036100.1 TAF15, Ceric.10G036100 component *(TAF15) of TFIId basal transcription... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.52 TAF15 RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Dde_g19815 TAF15 component *(TAF15) of TFIId basal transcription... 0.02 OrthoFinder output from all 47 species
Ehy_g10142 TAF15 component *(TAF15) of TFIId basal transcription... 0.02 OrthoFinder output from all 47 species
GSVIVT01010206001 TAF15 RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
LOC_Os07g19560.1 TAF15, LOC_Os07g19560 component TAF15 of TFIId basal transcription regulation complex 0.02 OrthoFinder output from all 47 species
LOC_Os09g12800.1 TAF15, LOC_Os09g12800 component TAF15 of TFIId basal transcription regulation complex 0.02 OrthoFinder output from all 47 species
MA_10434282g0010 TAF15 component TAF15 of TFIId basal transcription regulation complex 0.03 OrthoFinder output from all 47 species
Mp8g16600.1 TAF15 component TAF15 of TFIId basal transcription regulation complex 0.02 OrthoFinder output from all 47 species
Sam_g06399 No alias component *(TAF15) of TFIId basal transcription... 0.02 OrthoFinder output from all 47 species
Solyc11g040050.3.1 TAF15, Solyc11g040050 component TAF15 of TFIId basal transcription regulation complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 17 92
IPR001876 Znf_RanBP2 221 247
IPR001876 Znf_RanBP2 152 181
No external refs found!