Aliases : CLP2, CLPR2, NCLPP2
Description : proteolytic component *(ClpP2) of mitochondrion Clp-type protease complex & original description: none
Gene families : OG0006359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g09041 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00056550 | CLP2, CLPR2,... | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G12410 | CLP2, CLPR2, NCLPP2 | CLP protease proteolytic subunit 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015241 | CLP2, CLPR2, NCLPP2 | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02027 | CLP2, CLPR2, NCLPP2 | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g65702 | CLP2, CLPR2, NCLPP2 | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G057400.1 | CLP2, CLPR2,... | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g682900 | CLP2, CLPR2, NCLPP2 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g04553 | CLP2, CLPR2, NCLPP2 | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24333 | CLP2, CLPR2, NCLPP2 | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g25989 | CLP2, CLPR2, NCLPP2 | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g04530.1 | CLP2, CLPR2,... | proteolytic component ClpP2 of mitochondrion Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
| MA_1048g0020 | CLP2, CLPR2, NCLPP2 | proteolytic component ClpP2 of mitochondrion Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010456 | CLP2, CLPR2, NCLPP2 | proteolytic component *(ClpP2) of mitochondrion Clp-type... | 0.03 | OrthoFinder output from all 47 species | |
| Smo148310 | CLP2, CLPR2, NCLPP2 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036567_P002 | CLP2, CLPR2,... | proteolytic component ClpP2 of mitochondrion Clp-type... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 80 | 256 |
| No external refs found! |
