Aliases : PHR1, AtPHR1
Description : GARP subgroup PHL transcription factor & original description: none
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g09161 | |
| Cluster | HCCA: Cluster_130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00131p00063460 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g006433 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g006724 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g025472 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025473 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g11835 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g12428 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g10988 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13064 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01879 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12175 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12916 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g32108 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04252 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g07352 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g29353 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g30442 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05983 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22498 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene25096.t1 | Aspi01Gene25096 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene35964.t1 | Aspi01Gene35964 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene35965.t1 | Aspi01Gene35965 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene42025.t1 | HRS1, Aspi01Gene42025 | GARP subgroup HHO transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene45749.t1 | Aspi01Gene45749 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene59765.t1 | Aspi01Gene59765 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene64388.t1 | Aspi01Gene64388 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.31G067100.1 | Ceric.31G067100 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02748 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17436 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04920 | KAN2 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11610 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21970 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29468 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g30049 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g31337 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007065001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g40960.1 | LOC_Os05g40960 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g25820.2 | LOC_Os08g25820 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21596 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02992 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_201937g0010 | APL, WDY | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_6619111g0010 | KAN, KAN1 | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g24104 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02075 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19105 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29222 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g39083 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g55133 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c23_8710V3.1 | Pp3c23_8710 | myb-like HTH transcriptional regulator family protein | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g15588 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g22170 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g29510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014434 | No alias | not classified & original description: CDS=36-716 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0069.g016534 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04247 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g16091 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22319 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g51060 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56754 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g30427 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015514_P001 | KAN2, Zm00001e015514 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023282_P002 | KAN2, Zm00001e023282 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e033756_P003 | Zm00001e033756 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
