1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g09311

Ore_g09311 (TIF3H1)


Aliases : TIF3H1

Description : component *(eIF3h) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004382_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g09311

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00087p00135370 TIF3H1,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Aspi01Gene20701.t1 TIF3H1, Aspi01Gene20701 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g15219 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031659001 TIF3H1 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Gb_04869 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Pir_g05543 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Spa_g10694 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Tin_g05492 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e040713_P002 TIF3H1, Zm00001e040713 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 27 125
IPR045810 eIF3h_C 148 340
No external refs found!