Ore_g09320

Description : subunit epsilon *(CCT5) of CCT chaperonin folding complex & original description: none

Gene families : OG0005131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005131_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g09320

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00173980	evm_27.TU.AmTr_v1...	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	OrthoFinder output from all 47 species
AT1G24510	No alias	TCP-1/cpn60 chaperonin family protein	0.04	OrthoFinder output from all 47 species
Aev_g12956	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.04	OrthoFinder output from all 47 species
Ala_g06734	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.03	OrthoFinder output from all 47 species
Cba_g08464	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.02	OrthoFinder output from all 47 species
Ceric.01G032800.1	Ceric.01G032800	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.08	OrthoFinder output from all 47 species
Cre03.g156750	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
Dde_g26518	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.02	OrthoFinder output from all 47 species
Ehy_g08489	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.02	OrthoFinder output from all 47 species
GSVIVT01000590001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
GSVIVT01020856001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
Gb_12826	No alias	CCT5 subunit epsilon of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Gb_40545	No alias	CCT5 subunit epsilon of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
LOC_Os06g36700.1	LOC_Os06g36700	CCT5 subunit epsilon of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Lfl_g19360	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.05	OrthoFinder output from all 47 species
MA_10435597g0010	No alias	CCT5 subunit epsilon of CCT chaperonin folding complex	0.05	OrthoFinder output from all 47 species
Mp7g17510.1	No alias	CCT5 subunit epsilon of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Sam_g18778	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.02	OrthoFinder output from all 47 species
Smo158694	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	OrthoFinder output from all 47 species
Solyc05g013990.3.1	Solyc05g013990	CCT5 subunit epsilon of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Spa_g12182	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.02	OrthoFinder output from all 47 species
Tin_g01058	No alias	subunit epsilon *(CCT5) of CCT chaperonin folding...	0.03	OrthoFinder output from all 47 species
Zm00001e011557_P001	Zm00001e011557	CCT5 subunit epsilon of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Zm00001e032727_P001	Zm00001e032727	CCT5 subunit epsilon of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	40	531

External Links

No external refs found!

Ore_g09320

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation