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  5. Ore_g10219

Ore_g10219


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10219

Target Alias Description ECC score Gene Family Method Actions
AT3G13430 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g088306 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01998 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.05 OrthoFinder output from all 47 species
Ceric.32G049400.1 Ceric.32G049400 not classified & original description: pacid=50598110... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.42 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dde_g08151 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26594 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12946 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g44240.1 LOC_Os01g44240 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g07549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16162 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g25714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428335g0020 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species
Ore_g41837 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52386 No alias E3 ubiquitin ligase *(SNIPER) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08830 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23873 No alias RING-H2-class BTL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 400 441
IPR039525 RNF126-like_zinc-ribbon 26 61
No external refs found!