Ore_g10687


Description : E3 ubiquitin ligase *(DA2) & original description: none


Gene families : OG0002364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10687

Target Alias Description ECC score Gene Family Method Actions
Aev_g05523 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09080 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48762 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05324 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0319.g064436 No alias E3 ubiquitin ligase *(DA2) & original description: CDS=250-1674 0.03 OrthoFinder output from all 47 species
Ceric.18G086000.1 Ceric.18G086000 E3 ubiquitin ligase *(DA2) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g09989 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27416 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29274 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_31565 No alias E3 ubiquitin ligase (DA2) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06120.1 LOC_Os06g06120 E3 ubiquitin ligase (DA2) 0.02 OrthoFinder output from all 47 species
Len_g03773 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31332 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
MA_487602g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g11059 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14212 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02197 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0196.g025497 No alias E3 ubiquitin ligase *(DA2) & original description: CDS=113-1708 0.05 OrthoFinder output from all 47 species
Sam_g11204 No alias E3 ubiquitin ligase *(DA2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!