Aliases : NF-YC2, ATHAP5B, HAP5B
Description : component *(NF-YC) of NF-Y transcription factor complex & original description: none
Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g11136 | |
| Cluster | HCCA: Cluster_118 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g060663 | NF-YC2, ATHAP5B, HAP5B | component *(NF-YC) of NF-Y transcription factor complex... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0130.g022054 | NF-YC2, ATHAP5B, HAP5B | component *(NF-YC) of NF-Y transcription factor complex... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g079870.4.1 | NF-YC3, Solyc01g079870 | component NF-YC of NF-Y transcription factor complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010042_P001 | NF-YC2, ATHAP5B,... | component NF-YC of NF-Y transcription factor complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030374_P001 | NF-YC2, ATHAP5B,... | component NF-YC of NF-Y transcription factor complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 112 | 184 |
| No external refs found! |
