1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g11151

Ore_g11151 (LRL3)


Aliases : LRL3

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g11151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00032460 PIL5, PIF1,... External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
Als_g06024 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g34054 UNE12 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03428 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05211 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67543.t1 SPT, Aspi01Gene67543 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68524.t1 SPT, Aspi01Gene68524 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13645 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G046500.1 SPT, Ceric.13G046500 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.22G021400.1 CIB5, Ceric.22G021400 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.39G010000.1 LRL3, Ceric.39G010000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09242 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09859 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03638 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06129 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01021787001 UNE12 RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Gb_37017 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os06g30090.1 RHD6, LOC_Os06g30090 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
MA_10287127g0010 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
MA_14417g0020 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_26114g0010 SPT transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g01031 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31317 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02784 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13554 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g32176 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006090 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g28681 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08390 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002331_P003 UNE10, Zm00001e002331 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e010540_P001 Zm00001e010540 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 264 309
No external refs found!