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  5. Ore_g11364

Ore_g11364


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g11364

Target Alias Description ECC score Gene Family Method Actions
Als_g33633 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09773.t1 Aspi01Gene09773 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G009300.1 Ceric.15G009300 E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g08435 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g06920.2 LOC_Os02g06920 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Lfl_g04526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g069350.2.1 Solyc11g069350 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e040499_P001 Zm00001e040499 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 257 304
No external refs found!