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  5. Ore_g11403

Ore_g11403 (RAP2.6)


Aliases : RAP2.6

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g11403

Target Alias Description ECC score Gene Family Method Actions
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.02 OrthoFinder output from all 47 species
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 OrthoFinder output from all 47 species
Adi_g016418 RAP2.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02279 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g14106 DEAR2 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Ala_g14492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14120 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g30791 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g48036 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33993 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g11707 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g15011 DEAR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29381 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g33217 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g65014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03162.t1 Aspi01Gene03162 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21107.t1 ORA47, Aspi01Gene21107 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43376.t1 DREB26, Aspi01Gene43376 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43377.t1 DREB26, Aspi01Gene43377 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70900.t1 Aspi01Gene70900 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000091 ATERF-9, ERF9, ATERF9 not classified & original description: CDS=1-585 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038117 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Cba_g04461 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g35071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G035700.1 ATERF8, ATERF-8,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G030400.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g16040 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dde_g06699 Rap2.6L not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26909 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00325 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08138 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ehy_g15133 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g23088 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28249 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01021098001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01037712001 ATERF3, ERF3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Len_g28544 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_5805979g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.04 OrthoFinder output from all 47 species
MA_66742g0010 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g08368 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01764 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g25668 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30106 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g31608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15637 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g27504 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11929 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15852 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Ppi_g41606 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63080 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g16459 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52552 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc08g078190.2.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc09g089930.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Tin_g08822 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e015219_P001 Zm00001e015219 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e026911_P005 DREB2A, DREB2,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e033790_P001 Zm00001e033790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e041533_P001 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 166 213
No external refs found!