Aliases : AGO4, OCP11
Description : siRNA-integrating factor *(AGO) & original description: none
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00058p00069070 | AGO7, ZIP,... | Chromatin organisation.DNA methylation.canonical... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016083 | PNH, AGO10, ZLL | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086261 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113326 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g33064 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11125 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G056900.1 | AGO1, Ceric.28G056900 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Cre02.g141050 | AGO1 | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| Cre04.g214250 | AGO1 | Protein argonaute 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012529001 | AGO7, ZIP | Protein argonaute 7 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g06770.2 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g39640.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
| MA_123150g0010 | AGO7, ZIP | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g06977 | AGO5 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g66376 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_26780V3.1 | AGO9, Pp3c4_26780 | Argonaute family protein | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007503 | AGO1 | not classified & original description: CDS=68-2746 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011378 | AGO1 | siRNA-binding factor *(AGO2) of non-canonical RdDM... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g008960.3.1 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g069260.3.1 | AGO2, Solyc02g069260 | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g23108 | AGO9 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g57163 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e025496_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029696_P001 | AGO1, Zm00001e029696 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| No external refs found! |
