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  5. Ore_g12878

Ore_g12878


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g12878
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036768 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59996 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14586.t1 Aspi01Gene14586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67071.t1 Aspi01Gene67071 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008858 No alias not classified & original description: CDS=1-2760 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038564 EMB2758 not classified & original description: CDS=1-2661 0.03 OrthoFinder output from all 47 species
Azfi_s0808.g087728 CRR22 not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Azfi_s1835.g107332 CRR22 not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03344 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os09g34870.1 LOC_Os09g34870 Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
Len_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14836 OTP80 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38362 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01285 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03200 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12881 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19780 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26218 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44325 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g44449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g02808 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19567 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57540 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57720 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63456 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24963 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27926 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Zm00001e015358_P001 Zm00001e015358 Pentatricopeptide repeat-containing protein At5g39350... 0.02 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 24 48
IPR002885 Pentatricopeptide_repeat 60 84
No external refs found!