Ore_g13293 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g13293

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00256920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00071780 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00107400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
AMTR_s02193p00008230 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.05 OrthoFinder output from all 47 species
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003802 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g016117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016795 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021159 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09204 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23848 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32785 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32884 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40066 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36536 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16165 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68781.t1 MEF21, Aspi01Gene68781 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014413 No alias not classified & original description: CDS=1-1530 0.04 OrthoFinder output from all 47 species
Azfi_s0047.g030253 CRR22 not classified & original description: CDS=1-1500 0.05 OrthoFinder output from all 47 species
Azfi_s0068.g036353 No alias not classified & original description: CDS=1-2463 0.02 OrthoFinder output from all 47 species
Azfi_s0138.g051109 No alias not classified & original description: CDS=1-2523 0.05 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G071100.1 Ceric.02G071100 not classified & original description: pacid=50585515... 0.03 OrthoFinder output from all 47 species
Ceric.13G052000.1 Ceric.13G052000 not classified & original description: pacid=50635571... 0.04 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.03 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.04 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.03 OrthoFinder output from all 47 species
Ceric.28G068900.1 Ceric.28G068900 not classified & original description: pacid=50570286... 0.03 OrthoFinder output from all 47 species
Ceric.34G057600.1 Ceric.34G057600 not classified & original description: pacid=50623573... 0.03 OrthoFinder output from all 47 species
Dcu_g21154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09208 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22598 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26090 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01007974001 No alias Pentatricopeptide repeat-containing protein At5g61400... 0.03 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
GSVIVT01028154001 No alias Pentatricopeptide repeat-containing protein At2g35030,... 0.04 OrthoFinder output from all 47 species
GSVIVT01037562001 PDE247, CLB19 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_00259 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Gb_03578 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_05554 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_10113 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
Gb_11688 CRR2 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Gb_14172 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_14867 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_17379 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Gb_20910 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_21567 CRR22 RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
Gb_27891 OTP86 RNA editing factor (OTP86) 0.04 OrthoFinder output from all 47 species
Gb_29995 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
Gb_31457 EMB2261 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Gb_31702 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_36538 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_39402 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g58100.1 OTP85, LOC_Os03g58100 RNA editing factor (OTP85) 0.05 OrthoFinder output from all 47 species
LOC_Os07g02280.1 LOC_Os07g02280 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Len_g18456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05734 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07048 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_81514g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Msp_g19554 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41230 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41276 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04969 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08298 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27954 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38400 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23094 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32185 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11830 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13533 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04238 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06218 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g15680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003208 No alias monogalactosyldiacylglycerol lipase *(HIL1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007686 No alias not classified & original description: CDS=1-1089 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015021 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015176 No alias not classified & original description: CDS=1-1458 0.03 OrthoFinder output from all 47 species
Sam_g08403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo73641 EMB2758 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc07g005850.3.1 Solyc07g005850 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Spa_g19054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06092 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19926 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.04 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.05 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Zm00001e021457_P001 CRR22, Zm00001e021457 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e023498_P001 VAC1, ECB2,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.02 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 105 152
IPR002885 Pentatricopeptide_repeat 207 253
IPR002885 Pentatricopeptide_repeat 4 51
IPR002885 Pentatricopeptide_repeat 282 305
IPR002885 Pentatricopeptide_repeat 181 206
IPR046848 E_motif 326 381
No external refs found!