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  5. Ore_g13957

Ore_g13957


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g13957

Target Alias Description ECC score Gene Family Method Actions
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G02060 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g108057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10098 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g07262 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27691 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g31158 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22986 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029458001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_25991 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_25992 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g51130.1 LOC_Os04g51130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g45890.1 LOC_Os06g45890 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
MA_181986g0010 ATMYR1, MYR1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
MA_218023g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g18681 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g12596 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080730.2.1 Solyc02g080730 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc04g079600.3.1 KAN4, ATS, Solyc04g079600 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc08g076400.3.1 KAN2, Solyc08g076400 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e033757_P002 Zm00001e033757 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e037761_P001 Zm00001e037761 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 25 75
No external refs found!