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  5. Ore_g15069

Ore_g15069


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15069

Target Alias Description ECC score Gene Family Method Actions
AT3G13430 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G60080 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012553 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g088306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g02428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g08904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01998 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aob_g03081 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15225.t1 Aspi01Gene15225 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0006.g010490 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Azfi_s0132.g049293 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Cba_g10356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.08 OrthoFinder output from all 47 species
Ceric.32G049400.1 Ceric.32G049400 not classified & original description: pacid=50598110... 0.02 OrthoFinder output from all 47 species
Dac_g07739 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dde_g51480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019972001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os01g44240.1 LOC_Os01g44240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g01200.1 LOC_Os06g01200 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
LOC_Os06g42700.1 LOC_Os06g42700 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38060.1 LOC_Os08g38060 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g27734 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g28304 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g30265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Mp8g17140.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g25713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41838 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52386 No alias E3 ubiquitin ligase *(SNIPER) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08830 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g30226 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008140 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021939 No alias not classified & original description: CDS=1-1164 0.04 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g088030.1.1 Solyc02g088030 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g018050.1.1 Solyc05g018050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g08969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003411_P001 Zm00001e003411 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 225 267
No external refs found!