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  5. Ore_g15168

Ore_g15168 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : not classified & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15168

Target Alias Description ECC score Gene Family Method Actions
Ehy_g10607 PEN3, ABCG36,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017197001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
Gb_41757 PEN3, ABCG36,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
MA_10437197g0020 PDR6, ATPDR6 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g24380.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Sam_g12436 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc05g053570.4.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1 122
No external refs found!