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  5. Ore_g15365

Ore_g15365 (ATCSP2, GRP2, CSDP2, CSP2)


Aliases : ATCSP2, GRP2, CSDP2, CSP2

Description : cold-responsive mRNA chaperone *(CSD) & original description: none


Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15365

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene09691.t1 GRP2B, ATGRP2B,... cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Solyc10g055250.1.1 ATCSP2, GRP2,... RNA chaperone (CSP). mRNA chaperone (CSD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 202 217
IPR001878 Znf_CCHC 149 164
IPR001878 Znf_CCHC 246 261
IPR002059 CSP_DNA-bd 9 72
No external refs found!