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  5. Ore_g15676

Ore_g15676


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15676

Target Alias Description ECC score Gene Family Method Actions
AT5G13270 RARE1 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06729 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14144 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008050 No alias not classified & original description: CDS=1-3306 0.03 OrthoFinder output from all 47 species
Cba_g20647 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G059800.1 Ceric.09G059800 not classified & original description: pacid=50588067... 0.04 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.03 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.02 OrthoFinder output from all 47 species
Ceric.23G032000.1 Ceric.23G032000 not classified & original description: pacid=50611416... 0.03 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.03 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008922001 No alias Pentatricopeptide repeat-containing protein At4g08210... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.02 OrthoFinder output from all 47 species
LOC_Os08g38610.1 LOC_Os08g38610 Pentatricopeptide repeat-containing protein At1g26900,... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Lfl_g13055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Msp_g14364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28536 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48712 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29294 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44362 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04990 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020215 No alias not classified & original description: CDS=1-5316 0.03 OrthoFinder output from all 47 species
Sam_g13838 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Solyc09g015370.1.1 Solyc09g015370 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Spa_g21861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 414 461
IPR002885 Pentatricopeptide_repeat 617 664
IPR002885 Pentatricopeptide_repeat 718 765
IPR002885 Pentatricopeptide_repeat 111 160
IPR002885 Pentatricopeptide_repeat 212 261
IPR002885 Pentatricopeptide_repeat 314 360
IPR002885 Pentatricopeptide_repeat 515 563
IPR002885 Pentatricopeptide_repeat 690 717
IPR002885 Pentatricopeptide_repeat 590 616
IPR002885 Pentatricopeptide_repeat 792 816
IPR002885 Pentatricopeptide_repeat 288 313
No external refs found!