Ore_g15750 (ATTRB1, TRB1)

Aliases : ATTRB1, TRB1

Description : PRC2-recruiting factor (TRB) of PRC2 histone methylation complex & original description: none

Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g15750
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method	Actions
Ehy_g03477	ATTRB1, TRB1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e020563_P001	ATTBP3, TRB2,...	Single myb histone 2 OS=Zea mays (sp\|b4ft40\|smh2_maize : 340.0)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005818	Histone_H1/H5_H15	129	187
IPR001005	SANT/Myb	18	68

External Links

No external refs found!