Aliases : PUB8, B80
Description : E3 ubiquitin ligase *(PUB8) & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g01345 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g19819 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007619 | PUB13, ATPUB13 | not classified & original description: CDS=1-951 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z013500.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z057600.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G012900.1 | Ceric.26G012900 | not classified & original description: pacid=50598948... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09056 | PUB12, AtPUB12 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021265001 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g60860.1 | LOC_Os01g60860 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_103976g0010 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Mp5g12560.1 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g14682 | ATPUB45, PUB45 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38088 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16896 | PUB13, ATPUB13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30472 | PUB13, ATPUB13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g33917 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0077.g017664 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=217-2226 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0117.g021169 | No alias | not classified & original description: CDS=1-882 | 0.03 | OrthoFinder output from all 47 species | |
| Smo231208 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077850.3.1 | Solyc04g077850 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07352 | ATPUB17, PUB17 | E3 ubiquiTin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14575 | PUB18, ATPUB18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003398_P001 | PUB15, Zm00001e003398 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036734_P001 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| No external refs found! |
