Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1
Description : endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA biogenesis complex & original description: none
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G01040 | DCL1, CAF,... | dicer-like 1 | 0.08 | OrthoFinder output from all 47 species | |
| AT3G03300 | ATDCL2, DCL2 | dicer-like 2 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G20320 | DCL4, ATDCL4 | dicer-like 4 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g017408 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g022447 | DCL1, CAF,... | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13307 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g06264 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene32281.t1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.01G108700.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G041000.1 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000144.32 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000741.30 | DCL1, CAF,... | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g13692 | DCL1, CAF,... | endoribonuclease (DCL2) of transacting siRNA pathway &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36083 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18573 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001045001 | DCL4, ATDCL4 | RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g43050.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g28527 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432726g0010 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10436554g0010 | DCL4, ATDCL4 | component DRB7 of DRB4-DRB7.1 siRNA biogenesis regulator complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_10436812g0020 | DCL4, ATDCL4 | Dicer-like protein 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10437243g0010 | DCL1, CAF,... | endoribonuclease component DCL1 of DCL1-HYL1 miRNA... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10437243g0020 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Mp7g12090.1 | DCL1, CAF,... | endoribonuclease component DCL1 of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07904 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo444049 | DCL1, CAF,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g005030.4.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4). component DRB7 of DRB4-DRB7.1... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10539 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g28946 | DCL1, CAF,... | endoribonuclease *(DCL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29214 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacTing siRNA pathway &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000158_P001 | DCL1, CAF,... | endoribonuclease component DCL1 of DCL1-HYL1 miRNA... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e018890_P004 | ATDCL3, DCL3,... | endoribonuclease (DCL3) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041209_P001 | DCL4, ATDCL4,... | endoribonuclease (DCL4). component DRB7 of DRB4-DRB7.1... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| No external refs found! |
