1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g16236

Ore_g16236 (ATHB1, ATHB-1, HAT5,...)


Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1

Description : regulatory protein *(LMI1) of floral meristem identity control & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16236
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 OrthoFinder output from all 47 species
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.02 OrthoFinder output from all 47 species
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.02 OrthoFinder output from all 47 species
Adi_g111379 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g10561 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g17810 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g32740 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Als_g63335 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30544.t1 ATHB5, ATHB-5,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32029.t1 ATHB5, ATHB-5,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68244.t1 ATHB3, HB-3,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72348.t1 ATHB3, HB-3,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Cba_g03981 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g16857 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G054300.1 ATHB16, HB16,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.4 HAT14 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Dac_g06972 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07592 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g16691 ATHB16, HB16, ATHB-16 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Gb_35959 ATHB40, HB40, HB-5 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43330.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
LOC_Os09g21180.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Lfl_g11869 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g13122 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_12866g0010 ATHB21, HB21, HB-2 transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
MA_128g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_3951g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
MA_441783g0010 AtHB23, HB23 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06999 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07680 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13843 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32938 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc03g034120.3.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
Solyc10g150101.1.1 ATHB52, HB52,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Spa_g18476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01589 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004226_P001 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 93 127
IPR001356 Homeobox_dom 37 91
No external refs found!