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  5. Ore_g16303

Ore_g16303


Description : subunit delta *(CCT4) of CCT chaperonin folding complex & original description: none


Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16303
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT3G18190 No alias TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Ala_g31751 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043269 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Cba_g04618 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.25 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.01 OrthoFinder output from all 47 species
Cre05.g234639 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Dcu_g03883 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Gb_12950 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g22780.1 LOC_Os02g22780 CCT4 subunit delta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
MA_18588g0010 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Mp6g14150.1 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Msp_g07185 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Nbi_g00973 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Solyc03g118910.1.1 Solyc03g118910 CCT4 subunit delta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Tin_g00914 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Zm00001e000128_P002 Zm00001e000128 CCT4 subunit delta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 39 533
No external refs found!