Ore_g16460 (WRKY3)

Aliases : WRKY3

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g16460

Target	Alias	Description	ECC score	Gene Family Method
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.03	OrthoFinder output from all 47 species
Adi_g021146	WRKY26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g09958	WRKY1, ZAP1, ATWRKY1	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20940	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33662	WRKY26	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g23484	WRKY49, ATWRKY49	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene11216.t1	WRKY9, ATWRKY9,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene17672.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene29537.t1	AtWRKY20,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene48248.t2	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene51492.t1	WRKY4, Aspi01Gene51492	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene52849.t2	Aspi01Gene52849	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene57082.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64204.t2	AtWRKY20,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64693.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65372.t1	WRKY75,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0050.g031134	AtWRKY20, WRKY20	WRKY-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Azfi_s0052.g031586	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: CDS=1-864	0.04	OrthoFinder output from all 47 species
Cba_g06558	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.12G025600.1	AtWRKY20,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.13G001000.1	WRKY3, Ceric.13G001000	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g39335	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01492	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os04g46060.1	LOC_Os04g46060	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
LOC_Os07g39480.1	AtWRKY20,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g50898	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09240	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g10933	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g03099	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14502	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15530	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18275	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g17624	WRKY3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c22_12880V3.1	ATWRKY50,...	WRKY DNA-binding protein 48	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022621	ATWRKY71, WRKY71	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g28344	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g42764	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e035385_P002	AtWRKY20,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	325	380
IPR003657	WRKY_dom	506	563

External Links

No external refs found!

Ore_g16460 (WRKY3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation