Ore_g16855


Description : not classified & original description: none


Gene families : OG0007025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16855

Target Alias Description ECC score Gene Family Method Actions
AT5G27290 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.04 OrthoFinder output from all 47 species
Aob_g04193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G014800.1 Ceric.32G014800 not classified & original description: pacid=50597545... 0.04 OrthoFinder output from all 47 species
Dcu_g14284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01022011001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_32643 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g22580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g12720.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g11399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017846 No alias not classified & original description: CDS=1482-2534 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!