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  5. Ore_g16899

Ore_g16899 (HB6, ATHB6)


Aliases : HB6, ATHB6

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16899

Target Alias Description ECC score Gene Family Method Actions
Cba_g27646 ATHB3, HB-3, ATHB-3, HAT7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011377001 ATHB3, HB-3, ATHB-3, HAT7 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Gb_20878 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Msp_g09793 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g05818 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g26806 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013473 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016096 ATHB5, ATHB-5, HB5 not classified & original description: CDS=182-1414 0.02 OrthoFinder output from all 47 species
Sam_g10250 No alias HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 119 160
IPR001356 Homeobox_dom 64 117
No external refs found!