Ore_g17090 (CDF3)

Aliases : CDF3

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g17090

Target	Alias	Description	ECC score	Gene Family Method
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	OrthoFinder output from all 47 species
Als_g15817	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28312	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene01246.t1	Aspi01Gene01246	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g10006	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12009	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18747	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g30637	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Gb_20867	CDF3	Cyclic dof factor 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_23561	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Lfl_g16402	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g03486	TMO6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g38623	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g44057	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g05506	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g12534	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g60948	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	61	117

External Links

No external refs found!

Ore_g17090 (CDF3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation