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  5. Ore_g17180

Ore_g17180


Description : component *(PetM/VII) of cytochrome b6/f complex & original description: none


Gene families : OG0007944 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g17180
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT2G26500 No alias cytochrome b6f complex subunit (petM), putative 0.04 OrthoFinder output from all 47 species
Aev_g07600 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Ala_g12927 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
Als_g54693 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Aop_g09963 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18201.t1 Aspi01Gene18201 component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Ceric.32G011800.1 Ceric.32G011800 component *(PetM/VII) of cytochrome b6/f complex &... 0.02 OrthoFinder output from all 47 species
Dde_g41229 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01009587001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Gb_00822 No alias component PetM/VII of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
LOC_Os03g55720.2 LOC_Os03g55720 component PetM/VII of cytochrome b6/f complex 0.07 OrthoFinder output from all 47 species
Len_g11628 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
Len_g29641 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Len_g37664 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.02 OrthoFinder output from all 47 species
MA_10294942g0010 No alias component PetM/VII of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
Mp1g07170.1 No alias component PetM/VII of cytochrome b6/f complex 0.06 OrthoFinder output from all 47 species
Nbi_g20551 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Pp3c6_20300V3.1 Pp3c6_20300 cytochrome b6f complex subunit (petM), putative 0.01 OrthoFinder output from all 47 species
Ppi_g55276 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Smo438339 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Solyc01g109040.4.1 Solyc01g109040 component PetM/VII of cytochrome b6/f complex 0.06 OrthoFinder output from all 47 species
Tin_g27169 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e011966_P002 Zm00001e011966 component PetM/VII of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
Zm00001e011967_P001 Zm00001e011967 component PetM/VII of cytochrome b6/f complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR012595 PetM_cyt_b6/f_cplx_su7 92 119
No external refs found!