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  5. Ore_g18969

Ore_g18969 (ATEXPA3, EXP3, ATHEXP...)


Aliases : ATEXPA3, EXP3, ATHEXP ALPHA 1.9, ATEXP3

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g18969

Target Alias Description ECC score Gene Family Method Actions
AT1G65680 ATHEXP BETA 1.4,... expansin B2 0.04 OrthoFinder output from all 47 species
AT3G60570 ATHEXP BETA 1.3,... expansin B5 0.04 OrthoFinder output from all 47 species
Aspi01Gene03879.t1 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25448 EXPB3, ATEXPB3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g25635 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25653 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26026 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41089 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50026 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_41212g0010 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Mp1g28890.1 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Pir_g28363 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c13_20360V3.1 ATEXPA10,... expansin A9 0.01 OrthoFinder output from all 47 species
Pp3c7_12810V3.1 ATEXPA4, ATEXP4,... expansin A14 0.01 OrthoFinder output from all 47 species
Tin_g07004 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014247_P001 ATHEXP ALPHA... Expansin-A23 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 162 240
IPR009009 RlpA-like_DPBB 64 151
No external refs found!