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  5. Ore_g19957

Ore_g19957 (PRT1)


Aliases : PRT1

Description : type-II-residues E3 ubiquitin ligase *(PRT1) & original description: none


Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g19957

Target Alias Description ECC score Gene Family Method Actions
Aob_g40838 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene44049.t1 PRT1, Aspi01Gene44049 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0384.g067465 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g23984 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11935 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species
Gb_36123 PRT1 type-II-residues E3 ubiquitin ligase (PRT1) 0.04 OrthoFinder output from all 47 species
Lfl_g30958 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 271 312
No external refs found!