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  5. Ore_g20020

Ore_g20020 (EXPA16, ATHEXP ALPHA...)


Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20020

Target Alias Description ECC score Gene Family Method Actions
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.03 OrthoFinder output from all 47 species
AT2G45110 ATHEXP BETA 1.1,... expansin B4 0.03 OrthoFinder output from all 47 species
AT5G39260 EXPA21, EXP21,... expansin A21 0.02 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19293 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26309 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08029 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12167 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51474 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52203 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14342.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1837.g107352 EXPA8, ATHEXP... not classified & original description: CDS=1-687 0.03 OrthoFinder output from all 47 species
Cba_g09346 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15318 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G045500.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G046400.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032681001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
GSVIVT01032935001 ATHEXP ALPHA ... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
GSVIVT01034162001 EXPA6, ATEXP6,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Gb_01048 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g41700.1 ATEXPA20,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Len_g59336 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14901 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01863 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47012 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05687 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06874 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc10g008440.3.1 EXPB3, ATEXPB3,... beta-class expansin 0.04 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Spa_g09301 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10234 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49386 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040578_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 157 234
IPR009009 RlpA-like_DPBB 64 146
No external refs found!