Aliases : LOF2, MYB105, ATMYB105
Description : MYB class-R2R3 subgroup-21 transcription factor & original description: none
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g20758 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00264600 | AtMYB117, LOF1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G73410 | MYB54, ATMYB54 | myb domain protein 54 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G27785 | PGA37, ATMYB118, MYB118 | myb domain protein 118 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G67300 | MYBR1, MYB44,... | myb domain protein r1 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g33950 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54281.t2 | AtMYB109,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63694.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g034350 | PGA37, ATMYB118, MYB118 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Cre07.g345350 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g01703 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09643 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007731001 | AtMYB98, MYB98 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g13310.1 | AtMYB109,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_9684426g0010 | MYB73, ATMYB73 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g17210.1 | ATMYB119, MYB119 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13372 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g076840.3.1 | ATMYB119,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g43768 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
