Ore_g20838 (RAP2.2)

Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g20838

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00129p00112550	ERF72, EBP,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT5G13330	Rap2.6L	related to AP2 6l	0.02	OrthoFinder output from all 47 species
Adi_g004344	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g045252	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g056296	ERF110	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Adi_g084219	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g31370	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g37382	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17354	RAP2.6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g36093	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aspi01Gene05660.t1	Aspi01Gene05660	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene48933.t1	RAP2.2, Aspi01Gene48933	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Azfi_s0070.g036745	ATERF-9, ERF9, ATERF9	not classified & original description: CDS=1-3831	0.02	OrthoFinder output from all 47 species
Cba_g08443	WIN1, SHN1	cutin and suberin biosynthesis transcription factor...	0.03	OrthoFinder output from all 47 species
Cba_g13770	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g26333	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g02635	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g03858	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g39891	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g04281	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g00325	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g00959	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ehy_g25390	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
GSVIVT01016684001	RAP2.12	Ethylene-responsive transcription factor RAP2-12...	0.02	OrthoFinder output from all 47 species
GSVIVT01028050001	HRE2	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Gb_20532	DEAR3	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	OrthoFinder output from all 47 species
LOC_Os01g54890.1	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g64790.1	ERF110, LOC_Os01g64790	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g08460.1	RAP2.12, LOC_Os03g08460	Ethylene-responsive transcription factor ERF073...	0.03	OrthoFinder output from all 47 species
Len_g20241	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
MA_8552524g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Mp1g20040.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Mp2g11080.1	HRE2	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Pir_g09597	CRF4	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g15417	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc01g090560.4.1	Solyc01g090560	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc09g075420.3.1	HRE2, Solyc09g075420	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc12g009490.3.1	WIN1, SHN1,...	transcription factor (ERF). SHN-type cutin and suberin...	0.02	OrthoFinder output from all 47 species
Tin_g06782	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Tin_g41807	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e000608_P002	Rap2.6L, Zm00001e000608	Ethylene-responsive transcription factor ERF073...	0.03	OrthoFinder output from all 47 species
Zm00001e004048_P002	RAP2.12, Zm00001e004048	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e017516_P001	HRE2, Zm00001e017516	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e023686_P001	Zm00001e023686	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e026192_P001	HRE2, Zm00001e026192	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e035837_P001	ERF72, EBP,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0016972	thiol oxidase activity	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
BP	GO:0034975	protein folding in endoplasmic reticulum	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	109	157

External Links

No external refs found!

Ore_g20838 (RAP2.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation