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  5. Ore_g20985

Ore_g20985 (ATTZF1, ATCTH)


Aliases : ATTZF1, ATCTH

Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20985

Target Alias Description ECC score Gene Family Method Actions
Adi_g016518 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Adi_g045996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0076.g037758 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Azfi_s0203.g057679 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cba_g05838 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cba_g21999 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Dac_g02872 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dde_g04448 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
GSVIVT01013901001 PEI1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
LOC_Os05g45020.1 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Ore_g15984 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Ore_g29048 No alias regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Ore_g41768 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Pir_g26219 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Solyc07g053750.1.1 SOM, Solyc07g053750 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Tin_g14922 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 162 183
No external refs found!