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  5. Aev_g16560

Aev_g16560


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g16560

Target Alias Description ECC score Gene Family Method Actions
AT1G14340 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
AT5G46870 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.02 OrthoFinder output from all 47 species
Ceric.25G062800.1 Ceric.25G062800 not classified & original description: pacid=50593278... 0.02 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7907g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013208 No alias not classified & original description: CDS=23-751 0.04 OrthoFinder output from all 47 species
Sam_g07486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024575_P001 Zm00001e024575 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 67
No external refs found!