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  5. Ore_g25355

Ore_g25355


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25355
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G19191 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g067918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074694 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07029 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24425.t1 OSB1, Aspi01Gene24425 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28263.t1 CRR22, Aspi01Gene28263 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61170.t1 OTP84, Aspi01Gene61170 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G029700.1 Ceric.03G029700 not classified & original description: pacid=50572783... 0.03 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.03 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.03 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G023200.1 CRR2, Ceric.39G023200 not classified & original description: pacid=50582462... 0.03 OrthoFinder output from all 47 species
Dac_g16781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Len_g03683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13048 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18251 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18801 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37517 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_43615g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g03167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12909 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44143 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04362 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27693 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003168 CRR22 not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008284 OTP84 not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107700 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo76226 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo82984 No alias Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
Smo84620 CRR2 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc01g081560.2.1 Solyc01g081560 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Spa_g06827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10760 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 341 396
IPR002885 Pentatricopeptide_repeat 97 122
IPR002885 Pentatricopeptide_repeat 197 223
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 224 271
IPR002885 Pentatricopeptide_repeat 123 169
No external refs found!