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  5. Ore_g26452

Ore_g26452


Description : clade F phosphatase & original description: none


Gene families : OG0000578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g26452

Target Alias Description ECC score Gene Family Method Actions
AT1G22280 PAPP2C phytochrome-associated protein phosphatase type 2C 0.03 OrthoFinder output from all 47 species
AT1G78200 No alias Protein phosphatase 2C family protein 0.02 OrthoFinder output from all 47 species
AT4G28400 No alias Protein phosphatase 2C family protein 0.03 OrthoFinder output from all 47 species
Aev_g00552 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37458 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02436 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015125 No alias clade F phosphatase & original description: CDS=264-1103 0.03 OrthoFinder output from all 47 species
Cba_g23426 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G118400.1 Ceric.01G118400 clade F phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g32565 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03275 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009035001 PAPP2C Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
LOC_Os04g37904.1 LOC_Os04g37904 clade F phosphatase 0.02 OrthoFinder output from all 47 species
Len_g09950 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08617 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g14150.1 No alias clade F phosphatase 0.04 OrthoFinder output from all 47 species
Msp_g07067 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24935 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03622 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05771 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55817 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10240 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07895 No alias clade F phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07896 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17248 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19235 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040034_P002 Zm00001e040034 clade F phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 58 289
No external refs found!