1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g26680

Ore_g26680


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g26680
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G77145 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
AT3G22970 No alias Protein of unknown function (DUF506) 0.04 OrthoFinder output from all 47 species
AT3G54550 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
AT4G14620 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
Adi_g003209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43866.t1 Aspi01Gene43866 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.04 OrthoFinder output from all 47 species
Ceric.03G008400.1 Ceric.03G008400 not classified & original description: pacid=50572986... 0.02 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.02 OrthoFinder output from all 47 species
Dac_g07905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006248001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01010039001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01018080001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01030534001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g11821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10117499g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_373131g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_6561322g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34202 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001909 No alias not classified & original description: CDS=1-747 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.04 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g25859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000474_P001 Zm00001e000474 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005992_P006 Zm00001e005992 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011452_P001 Zm00001e011452 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 80 272
No external refs found!